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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20126827_20126920_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20126827 - 20126920

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGCGGGGG

5'SS Class:

major

3'SS Sequence:

GCCGACCCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

GCTGCTCTGATG

Flanking Amino Acid:

MTLTHSCNTPWADNWLVDTA

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.1

0.36

1.1

47.7

42.7

Major BPS

0.72

38.9

Major PPT

59.1

0.2

0.9

50.2

33.8

Minor 5ss

22.2

-3.2

3.4

25.5

39.4

Minor BPS

45.1

-0.5

1.8

47.08

40.8

Associated Gene:

Gene:

DPEP1

Ensembl Gene ID:

ENSAPLG00000020169

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046040

20124992 - 20129270

4279