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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20126991_20127121_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20126991 - 20127121

Intron Length:

131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CCTGTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CAGCCCTCACCC

Flanking Amino Acid:

VHHGLSAFGKTVVEEMNRLG

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

0.5

0.8

65.4

30.4

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

46.8

-0.2

1.9

53.25

Associated Gene:

Gene:

DPEP1

Ensembl Gene ID:

ENSAPLG00000020169

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046040

20124992 - 20129270

4279