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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20131190_20131761_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20131190 - 20131761

Intron Length:

572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGGTTTT

5'SS Class:

major

3'SS Sequence:

TTCTCCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

CTGCTCTTATGC

Flanking Amino Acid:

VRSQEDQLSRRLAALRN*

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.64

1.2

79.9

Major BPS

79.1

0.72

69.3

38.4

Major PPT

85.5

0.8

0.7

77.2

31.5

Minor 5ss

41.1

-1

3.1

58.6

Minor BPS

46.7

-0.2

1.9

54.62

43.8

Associated Gene:

Gene:

CHMP1A

Ensembl Gene ID:

ENSAPLG00000005521

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005727

20131168 - 20136161

4994