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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20133485_20136137_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20133485 - 20136137

Intron Length:

2653

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGCAG

5'SS Class:

major

3'SS Sequence:

GCCTCCTTTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

CCGGCTCTAACC

Flanking Amino Acid:

VDDVLVVKFTAKQLEKLA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.3

0.41

1.1

53.5

Major BPS

72.3

0.55

73.3

28.9

Major PPT

77.9

0.63

0.8

68.5

37.3

Minor 5ss

29.1

-2.4

3.4

38.3

46.7

Minor BPS

-0.1

1.8

53.9

44.5

Associated Gene:

Gene:

CHMP1A

Ensembl Gene ID:

ENSAPLG00000005521

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005727

20131168 - 20136161

4994