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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20139558_20139639_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20139558 - 20139639

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

GCTGTCCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAC

U12 Branch Point Sequence:

GGAGCCGGGACC

Flanking Amino Acid:

PWRKEFGTVQTFSGAYVHSL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

57.2

0.18

1.4

63.1

44.5

Major PPT

76.7

0.6

0.9

69.4

36.8

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

41.7

-0.6

2.1

48.79

Associated Gene:

Gene:

SPATA2L

Ensembl Gene ID:

ENSAPLG00000024545

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031506

20138619 - 20139930

1312