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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20182969_20185009_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20182969 - 20185009

Intron Length:

2041

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGCAAA

5'SS Class:

major

3'SS Sequence:

CCATTCCTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTAAT

U12 Branch Point Sequence:

TGGGACCTAATT

Flanking Amino Acid:

QVPLLNLDQRDLPVLEAVWH

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

67.9

39.2

Major BPS

73.1

0.57

71.9

31.3

Major PPT

64.4

0.32

58.2

38.2

Minor 5ss

-1.1

2.8

45.1

43.8

Minor BPS

-0

1.9

66.38

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029231

20181124 - 20186788

5665