Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_20196606_20196728_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20196606 - 20196728

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGGGTGCC

5'SS Class:

major

3'SS Sequence:

TCTGCGCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTGAC

U12 Branch Point Sequence:

TCTGCGCCCACA

Flanking Amino Acid:

PSSSSKHLWLEFSHPVESLA

Intron Amino Acid Position:

707

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

63.5

36.3

Major BPS

45.4

-0.2

1.4

34.5

43.7

Major PPT

68.8

0.42

0.9

35.2

Minor 5ss

27.3

-2.6

3.2

31.8

37.6

Minor BPS

-1.1

2.6

51.63

46.1

Associated Gene:

Gene:

SPIRE2

Ensembl Gene ID:

ENSAPLG00000007054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007323

20190816 - 20198090

7275