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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20211340_20213109_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20211340 - 20213109

Intron Length:

1770

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTTCTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAA

U12 Branch Point Sequence:

GTGTAATCAAGT

Flanking Amino Acid:

VESMDPNNIVLLLQMNPYHV

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

73.2

38.4

Major BPS

71.2

0.53

72.3

32.8

Major PPT

0.63

0.8

73.4

31.6

Minor 5ss

48.1

-0.2

2.5

64.1

42.5

Minor BPS

43.9

-0.3

2.2

63.52

45.9

Associated Gene:

Gene:

TCF25

Ensembl Gene ID:

ENSAPLG00000007149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045576

20203607 - 20220488

16882

ENSAPLT00000007454

20203607 - 20220488

16882