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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20213210_20213888_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20213210 - 20213888

Intron Length:

679

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GTGCTGTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGATGAT

U12 Branch Point Sequence:

CGTGCCCTGATG

Flanking Amino Acid:

EDQEMARDLIERVLYSLECA

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.9

33.5

Major BPS

60.7

0.27

1.2

51.5

43.9

Major PPT

72.6

0.51

65.5

Minor 5ss

33.9

-1.8

3.5

49.9

46.5

Minor BPS

47.2

-0.3

1.9

51.64

43.3

Associated Gene:

Gene:

TCF25

Ensembl Gene ID:

ENSAPLG00000007149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045576

20203607 - 20220488

16882

ENSAPLT00000007454

20203607 - 20220488

16882