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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20218340_20218803_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20218340 - 20218803

Intron Length:

464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GCTCCCGCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTCAG

U12 Branch Point Sequence:

GTGCCGTCAGCT

Flanking Amino Acid:

RDPLVEECELKRKMRYQSAP

Intron Amino Acid Position:

485

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

72.1

31.2

Major BPS

44.4

-0.3

1.6

48.7

45.1

Major PPT

66.2

0.36

0.9

62.1

34.7

Minor 5ss

30.2

-2.3

3.1

36.2

34.2

Minor BPS

-0.4

2.3

62.76

46.7

Associated Gene:

Gene:

TCF25

Ensembl Gene ID:

ENSAPLG00000007149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045576

20203607 - 20220488

16882

ENSAPLT00000007454

20203607 - 20220488

16882