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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20247320_20248841_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20247320 - 20248841

Intron Length:

1522

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TCA|GCAACGTCC

5'SS Class:

weak_major

3'SS Sequence:

GGAGAGGCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTGGAG

U12 Branch Point Sequence:

CCCGCTGCAGGT

Flanking Amino Acid:

MPSGSLTTHVLNT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.6

0.02

1.4

55.2

41.2

Major BPS

-0.5

1.8

42.8

49.4

Major PPT

48.3

-0

1.1

35.2

40.8

Minor 5ss

35.4

-1.7

4.3

56.3

42.3

Minor BPS

30.7

-1.3

2.1

38.32

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003171

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003211

20246641 - 20248850

2210