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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20272217_20272587_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20272217 - 20272587

Intron Length:

371

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGGCT

5'SS Class:

major

3'SS Sequence:

AGCGCTGCATGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCCTAT

U12 Branch Point Sequence:

TGCTGCAGAAGC

Flanking Amino Acid:

LLVLQGGPKQELTGVTLVRA

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

63.5

40.9

Major BPS

0.25

1.2

58.5

Major PPT

43.5

-0.3

1.7

41.8

Minor 5ss

30.9

-2.2

3.7

48.2

47.4

Minor BPS

-0.7

2.2

52.78

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019647

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039568

20270996 - 20275559

4564