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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20273361_20274110_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20273361 - 20274110

Intron Length:

750

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TCTGTGCGTGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCTGAG

U12 Branch Point Sequence:

TCTGTCTGAGCT

Flanking Amino Acid:

VVRGIMEGTGAGGTDAEAAA

Intron Amino Acid Position:

361

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

69.1

43.2

Major BPS

49.8

-0

1.7

51.1

46.3

Major PPT

49.7

-0

1.8

57.5

43.2

Minor 5ss

30.2

-2.3

2.6

34.3

41.4

Minor BPS

51.6

0.13

1.8

72.08

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019647

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039568

20270996 - 20275559

4564