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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20298822_20298908_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20298822 - 20298908

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGCACC

5'SS Class:

major

3'SS Sequence:

CGGGGCCCCGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCCCAA

U12 Branch Point Sequence:

CTCGGGGTGACG

Flanking Amino Acid:

AVEYFLHAIKYEAQSDKAKE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.1

67.9

37.3

Major BPS

45.3

-0.2

1.2

35.2

Major PPT

55.9

0.13

46.7

36.7

Minor 5ss

37.6

-1.4

2.9

49.1

40.1

Minor BPS

32.3

-1.5

2.7

37.07

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021695

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029544

20298601 - 20301564

2964