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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20300643_20300724_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20300643 - 20300724

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TCCTCGGCGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAA

U12 Branch Point Sequence:

CCCCTCCCAACT

Flanking Amino Acid:

KVQSAMHFKKVRGPSRTNPN

Intron Amino Acid Position:

358

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

50.7

0.02

1.2

62.1

35.8

Major PPT

61.1

0.25

1.1

53.4

41.5

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

44.8

-0.3

1.9

57.59

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021695

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029544

20298601 - 20301564

2964