Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_20306901_20306984_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20306901 - 20306984

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGGGCG

5'SS Class:

major

3'SS Sequence:

GCCTCTGTCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

CGGTGCTCAGTG

Flanking Amino Acid:

ALDFLAPYAKYKVWVKPGSE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.5

0.37

1.3

41.5

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

70.2

0.45

0.9

36.7

Minor 5ss

24.5

-2.9

3.4

30.1

43.1

Minor BPS

40.1

-0.8

2.1

39.85

44.4

Associated Gene:

Gene:

NIP7

Ensembl Gene ID:

ENSAPLG00000007407

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007677

20303487 - 20307327

3841