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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20308790_20309895_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20308790 - 20309895

Intron Length:

1106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

CCCCTGCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCTAT

U12 Branch Point Sequence:

TGTTTGCTATCC

Flanking Amino Acid:

QSGNFFFSYEVQRATGFANS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

58.7

0.22

1.5

58.5

47.9

Major PPT

71.8

0.49

0.8

64.6

30.9

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

44.2

-0.4

2.4

63.27

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007408

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007686

20307847 - 20310708

2862