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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20314123_20315539_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
20314123 - 20315539

Intron Length:
1417

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAA|GTACGGAGC

5'SS Class:
major

3'SS Sequence:
TGCCTGCTTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CATAAAT

U12 Branch Point Sequence:
GCTGACATAAAT

Flanking Amino Acid:
PNQQESTENAKSREGKWSSL

Intron Amino Acid Position:
430

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.6
0.46
1.1
61.7
43.2

Major BPS
62.2
0.3
1.1
68.9
33

Major PPT
76.7
0.6
0.9
72.8
37.5

Minor 5ss
33.3
-1.9
3.4
42.5
38.9

Minor BPS
46.3
-0.2
2
64.16
45.3

Associated Gene:

Gene:
TERF2

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

20312256 - 20318986
6731