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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20317832_20317988_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
20317832 - 20317988

Intron Length:
157

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTGGGTCGC

5'SS Class:
major

3'SS Sequence:
GCCTTCTCTCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CATTCAA

U12 Branch Point Sequence:
CATTCAACAATC

Flanking Amino Acid:
LTRIEEGENLECSFDREMDL

Intron Amino Acid Position:
148

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.9
0.68
1
63.1
43.4

Major BPS
70.6
0.51
1
73.3
31.3

Major PPT
73.9
0.54
0.8
65.7
36.1

Minor 5ss
27.7
-2.6
3
35.1
41.4

Minor BPS
45.5
-0.3
2
58.31
40.2

Associated Gene:

Gene:
TERF2

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

20312256 - 20318986
6731