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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20318085_20318504_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
20318085 - 20318504

Intron Length:
420

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACGCCGG

5'SS Class:
major

3'SS Sequence:
TCTCACCCCCCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATCTCAC

U12 Branch Point Sequence:
CCCATCTCACCC

Flanking Amino Acid:
DFRQLRDVMQALLVRPLDKP

Intron Amino Acid Position:
116

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.6
0.6
1.1
54.7
49.5

Major BPS
76.2
0.65
0.9
77.4
26.5

Major PPT
71.8
0.49
0.8
62.2
34.4

Minor 5ss
36.2
-1.6
3.2
47.8
47.7

Minor BPS
43.4
-0.5
1.8
45.99
43.3

Associated Gene:

Gene:
TERF2

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

20312256 - 20318986
6731