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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20363391_20368406_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

20363391 - 20368406

Intron Length:

5016

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTCGGTCTT

5'SS Class:

major

3'SS Sequence:

ATTTTTATTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCTCATTTATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.3

72.7

44.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.4

0.82

0.8

78.6

39.1

Minor 5ss

34.2

-1.8

3.3

46.3

Minor BPS

60.6

0.42

1.9

81.15

40.6

Associated Gene:

Gene:

NFAT5

Ensembl Gene ID:

ENSAPLG00000007702

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043892

20362686 - 20387828

25143