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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20417671_20419097_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

20417671 - 20419097

Intron Length:

1427

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGGGC

5'SS Class:

major

3'SS Sequence:

GTCGTGCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

CAGCCTGTGACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.1

65.4

40.4

Major BPS

0.22

1.2

52.4

43.3

Major PPT

72.1

0.5

61.5

44.6

Minor 5ss

29.1

-2.4

3.5

32.5

42.6

Minor BPS

45.4

-0.3

51.92

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008423

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037861

20413752 - 20430990

17239