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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20421658_20423448_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

20421658 - 20423448

Intron Length:

1791

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAACAAT

U12 Branch Point Sequence:

CAGCTAACAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

80.7

33.8

Major BPS

57.4

0.18

1.3

65.4

Major PPT

80.3

0.68

0.8

73.8

36.9

Minor 5ss

35.6

-1.6

2.6

35.6

40.5

Minor BPS

38.5

-0.7

1.8

48.72

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008423

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037861

20413752 - 20430990

17239