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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20424150_20425978_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20424150 - 20425978

Intron Length:

1829

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGGGACAG

5'SS Class:

major

3'SS Sequence:

GCGGTGGCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGCAGAC

U12 Branch Point Sequence:

TCTGGCAGACCC

Flanking Amino Acid:

LQLCAWSRCSPLSLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.6

0.39

1.1

51.3

41.4

Major BPS

42.6

-0.4

1.2

32.1

34.8

Major PPT

54.5

0.1

45.8

41.4

Minor 5ss

24.6

-2.9

3.1

26.1

Minor BPS

38.8

-0.8

2.2

51.55

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008423

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008818

20424133 - 20429990

5858