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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20427175_20427289_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20427175 - 20427289

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTCCTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATCAC

U12 Branch Point Sequence:

TCGCCAGGAATC

Flanking Amino Acid:

PEFYNSIVWTKENSLEECGL

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

72.1

31.2

Major BPS

52.8

0.07

1.2

57.7

Major PPT

0.68

0.8

73.8

31.3

Minor 5ss

30.2

-2.3

3.1

36.2

34.2

Minor BPS

40.6

-0.7

2.2

49.63

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008423

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008818

20424133 - 20429990

5858

ENSAPLT00000037861

20413752 - 20430990

17239