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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20427431_20427938_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20427431 - 20427938

Intron Length:

508

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTCTG

5'SS Class:

major

3'SS Sequence:

CCTGCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

ACTGGCTGACCA

Flanking Amino Acid:

VTEENKEEYIMLLTDWRFTR

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

70.8

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

70.7

0.47

0.8

61.2

Minor 5ss

34.8

-1.7

3.1

45.9

42.4

Minor BPS

43.2

-0.5

2.1

53.95

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008423

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037861

20413752 - 20430990

17239

ENSAPLT00000008818

20424133 - 20429990

5858