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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20428060_20428390_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20428060 - 20428390

Intron Length:

331

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTGG

5'SS Class:

strong_major

3'SS Sequence:

GCCCTGTCCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CCCTGCTGACTG

Flanking Amino Acid:

LRYFDEKELELMLCGMQEID

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.8

42.7

Major BPS

66.3

0.4

1.1

41.8

Major PPT

62.3

0.28

0.9

53.3

36.7

Minor 5ss

37.8

-1.4

46.8

48.5

Minor BPS

40.3

-0.8

2.1

38.83

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008423

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037861

20413752 - 20430990

17239

ENSAPLT00000008818

20424133 - 20429990

5858