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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20428496_20428654_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20428496 - 20428654

Intron Length:

159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCCC

5'SS Class:

strong_major

3'SS Sequence:

GCTGTCGTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTGAT

U12 Branch Point Sequence:

GCTGTCGTCACA

Flanking Amino Acid:

NSKQIQWFWQVVKEMDNEKR

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

65.8

40.2

Major BPS

49.3

-0

1.5

42.8

49.4

Major PPT

67.9

0.4

60.2

40.4

Minor 5ss

33.7

-1.9

42.6

44.4

Minor BPS

42.9

-0.5

2.4

54.59

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008423

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037861

20413752 - 20430990

17239

ENSAPLT00000008818

20424133 - 20429990

5858