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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20429687_20429890_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20429687 - 20429890

Intron Length:

204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

GTTGTCTCGCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

TCACTGTTCACA

Flanking Amino Acid:

KETWLPRSHTCFNRLDLPPY

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

70.6

41.3

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

69.6

0.44

1.1

62.4

44.3

Minor 5ss

33.7

-1.9

2.9

38.1

40.9

Minor BPS

44.2

-0.4

2.3

56.69

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008423

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037861

20413752 - 20430990

17239

ENSAPLT00000008818

20424133 - 20429990

5858