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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20612875_20657505_F

Intron Information:

Intron Rank:

139684

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20612875 - 20657505

Intron Length:

44631

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTGGCTATT

5'SS Class:

weak_major

3'SS Sequence:

CAGAAAACATTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATCAA

U12 Branch Point Sequence:

TTTCTCAGAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.4

0.06

1.2

63.5

42.3

Major BPS

62.4

0.31

32.1

Major PPT

47.5

-0.1

38.4

Minor 5ss

42.9

-0.8

3.2

64.7

41.1

Minor BPS

49.2

-0

1.8

68.27

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025090

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043358

20611780 - 20659071

47292