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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20718143_20724304_F

Intron Information:

Intron Rank:

150842

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20718143 - 20724304

Intron Length:

6162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGACCCTC

5'SS Class:

weak_major

3'SS Sequence:

GCTGGTGCGAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTGCAG

U12 Branch Point Sequence:

TGTGCAGGGACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.9

0.26

1.2

56.9

42.6

Major BPS

44.4

-0.3

1.8

57.1

49.4

Major PPT

47.8

-0.1

1.2

43.8

41.7

Minor 5ss

44.2

-0.6

3.1

59.7

39.3

Minor BPS

40.9

-0.7

2.3

56.47

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031059

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019970

20717980 - 20725046

7067