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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20724320_20856047_F

Intron Information:

Intron Rank:

150845

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20724320 - 20856047

Intron Length:

131728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGCTGCGA

5'SS Class:

weak_major

3'SS Sequence:

CGTGGCTGGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCAGCAT

U12 Branch Point Sequence:

GCTCCTGTCAGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.4

0.08

1.1

40.5

41.6

Major BPS

50.7

0.02

1.5

44.2

Major PPT

55.1

0.12

1.2

49.7

43.9

Minor 5ss

23.2

-3.1

3.1

21.3

37.2

Minor BPS

38.8

-0.8

2.4

48.5

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031059

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046564

20705905 - 20856152

150248

ENSAPLT00000038172

20723599 - 20857024

133426