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Intron Name: Anas_platyrhynchos_platyrhynchos_12_20730422_20813742_F

Intron Information:

Intron Rank:

128476

Intron Class:

major

Intron Phase:

Intron Coordinates:

20730422 - 20813742

Intron Length:

83321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTTAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

TATTCCTTATGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

76.3

30.6

Major BPS

78.6

0.71

79.6

32.9

Major PPT

86.3

0.82

0.7

24.1

Minor 5ss

32.7

-2

3.1

39.4

46.5

Minor BPS

67.2

0.62

1.9

85.19

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019199

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022320

20730364 - 20890881

160518