Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_20861238_20861428_R

Intron Information:

Intron Rank:

136386

Intron Class:

major

Intron Phase:

Intron Coordinates:

20861238 - 20861428

Intron Length:

191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGTAAG

5'SS Class:

major

3'SS Sequence:

CACTTTCAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TGATCTGTAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.3

38.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

66.7

0.38

62.4

37.4

Minor 5ss

-2.2

2.6

32.6

Minor BPS

49.9

0.07

2.3

73.14

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028053

20859069 - 20862189

3121