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Intron Name: Anas_platyrhynchos_platyrhynchos_12_21084899_21085210_F

Intron Information:

Intron Rank:

131267

Intron Class:

major

Intron Phase:

Intron Coordinates:

21084899 - 21085210

Intron Length:

312

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAG|GCAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

ATATTTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AGCTTTTTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.8

1.15

0.7

91.8

25.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.4

0.71

0.9

78.7

38.8

Minor 5ss

29.8

-2.3

4.1

49.5

46.7

Minor BPS

0.47

1.2

65.41

35.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042198

21084853 - 21092051

7199

ENSAPLT00000032079

21082117 - 21094033

11917

ENSAPLT00000029799

21084853 - 21086146

1294

ENSAPLT00000025839

21083729 - 21094033

10305