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Intron Name: Anas_platyrhynchos_platyrhynchos_12_21199610_21199709_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21199610 - 21199709

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGCAGG

5'SS Class:

major

3'SS Sequence:

CCTTTGCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCAAAT

U12 Branch Point Sequence:

GCTGCCAAATCT

Flanking Amino Acid:

ASSEAELAQSRALAAWLQTE

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.1

63.8

47.8

Major BPS

48.8

-0

1.2

55.2

38.9

Major PPT

79.5

0.66

0.8

31.9

Minor 5ss

37.7

-1.4

3.1

48.9

46.9

Minor BPS

42.9

-0.4

2.2

61.16

48.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033923

21196731 - 21202233

5503