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Intron Name: Anas_platyrhynchos_platyrhynchos_12_21201670_21201783_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21201670 - 21201783

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTGAT

5'SS Class:

major

3'SS Sequence:

TTCTGTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTCAT

U12 Branch Point Sequence:

ACTGCCTCACCT

Flanking Amino Acid:

NHAAELTGNKEHLQDTLGSL

Intron Amino Acid Position:

609

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

75.1

35.1

Major BPS

73.5

0.58

73.6

32.5

Major PPT

85.1

0.79

0.8

76.9

37.4

Minor 5ss

35.6

-1.6

3.3

45.6

43.6

Minor BPS

50.5

0.09

70.25

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033923

21196731 - 21202233

5503