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Intron Name: Anas_platyrhynchos_platyrhynchos_12_21201878_21202077_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21201878 - 21202077

Intron Length:

200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

CCCGGCTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTAAT

U12 Branch Point Sequence:

GCCAGTGTAATT

Flanking Amino Acid:

EQYHKGEQMKGSNLTTGATH

Intron Amino Acid Position:

641

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

74.1

38.4

Major BPS

66.7

0.41

1.4

69.7

44.2

Major PPT

63.4

0.3

55.6

Minor 5ss

33.3

-1.9

2.8

45.7

Minor BPS

40.6

-0.6

2.2

52.11

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033923

21196731 - 21202233

5503