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Intron Name: Anas_platyrhynchos_platyrhynchos_12_21202741_21202971_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21202741 - 21202971

Intron Length:

231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTGCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

AGTCCCTGATCT

Flanking Amino Acid:

SIKHAGKSRQENRRRAKEEV

Intron Amino Acid Position:

1143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.8

81.3

32.8

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

73.2

0.52

0.9

65.1

41.2

Minor 5ss

33.3

-1.9

43.8

43.9

Minor BPS

55.9

0.26

1.8

74.31

41.6

Associated Gene:

Gene:

DHX38

Ensembl Gene ID:

ENSAPLG00000015279

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015971

21202372 - 21212055

9684