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Intron Name: Anas_platyrhynchos_platyrhynchos_12_21203582_21203660_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21203582 - 21203660

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

GATGTATTAACC

Flanking Amino Acid:

AYFHQAAKLKGIGEYVNIRT

Intron Amino Acid Position:

1069

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.2

35.1

Major BPS

81.9

0.79

0.8

81.9

Major PPT

83.6

0.76

0.8

79.9

32.1

Minor 5ss

29.8

-2.3

3.3

38.8

46.3

Minor BPS

56.3

0.18

1.7

65.28

39.9

Associated Gene:

Gene:

DHX38

Ensembl Gene ID:

ENSAPLG00000015279

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015971

21202372 - 21212055

9684