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Intron Name: Anas_platyrhynchos_platyrhynchos_12_21207042_21207302_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21207042 - 21207302

Intron Length:

261

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGTTG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGAAAT

U12 Branch Point Sequence:

GTACGAAGAAAT

Flanking Amino Acid:

AVQQELLSILRDNSIVIVVG

Intron Amino Acid Position:

529

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

70.6

42.2

Major BPS

50.6

0.02

1.1

36.4

Major PPT

89.6

0.89

0.6

88.3

21.5

Minor 5ss

39.3

-1.2

3.5

55.1

49.1

Minor BPS

35.8

-1

2.1

52.48

40.7

Associated Gene:

Gene:

DHX38

Ensembl Gene ID:

ENSAPLG00000015279

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015971

21202372 - 21212055

9684