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Intron Name: Anas_platyrhynchos_platyrhynchos_12_21209895_21210040_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21209895 - 21210040

Intron Length:

146

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAGT

5'SS Class:

strong_major

3'SS Sequence:

TTGCCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

GCCTGCTGACCA

Flanking Amino Acid:

GATPRLSRGRGRREDGEEGI

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.8

78.6

37.3

Major BPS

66.3

0.4

1.1

41.8

Major PPT

82.2

0.73

0.8

77.1

31.6

Minor 5ss

28.5

-2.5

3.1

39.7

45.9

Minor BPS

44.2

-0.4

2.1

52.35

45.6

Associated Gene:

Gene:

DHX38

Ensembl Gene ID:

ENSAPLG00000015279

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015971

21202372 - 21212055

9684