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Intron Name: Anas_platyrhynchos_platyrhynchos_12_21254589_21259585_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21254589 - 21259585

Intron Length:

4997

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTAAT

U12 Branch Point Sequence:

TTTAAGCTAATT

Flanking Amino Acid:

MLGYPAHFGQLECLKLIASQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

74.9

38.1

Major BPS

70.5

0.51

1.1

69.7

35.5

Major PPT

95.5

1.02

0.5

88.9

28.1

Minor 5ss

38.1

-1.3

3.1

48.2

47.9

Minor BPS

-0.2

2.4

74.59

42.1

Associated Gene:

Gene:

AP1G1

Ensembl Gene ID:

ENSAPLG00000014217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031037

21244921 - 21283471

38551

ENSAPLT00000018459

21244921 - 21287246

42326

ENSAPLT00000014910

21253681 - 21287246

33566

ENSAPLT00000032019

21244921 - 21287246

42326