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Intron Name: Anas_platyrhynchos_platyrhynchos_12_21263816_21264618_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21263816 - 21264618

Intron Length:

803

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATGTTG

5'SS Class:

major

3'SS Sequence:

TCCTGGTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

AATTGTAAAACA

Flanking Amino Acid:

TKNLLNEKNHGVLHTSVVLL

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

41.3

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

75.2

0.57

0.9

72.5

37.7

Minor 5ss

40.6

-1.1

3.3

52.4

45.8

Minor BPS

44.5

-0.4

2.2

59.56

40.3

Associated Gene:

Gene:

AP1G1

Ensembl Gene ID:

ENSAPLG00000014217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032019

21244921 - 21287246

42326

ENSAPLT00000031037

21244921 - 21283471

38551

ENSAPLT00000018459

21244921 - 21287246

42326

ENSAPLT00000014910

21253681 - 21287246

33566