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Intron Name: Anas_platyrhynchos_platyrhynchos_12_21269542_21269944_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21269542 - 21269944

Intron Length:

403

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTTGC

5'SS Class:

major

3'SS Sequence:

ACTCTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CTTTCCCTAACT

Flanking Amino Acid:

MDIKSESGLRVLAINILGRF

Intron Amino Acid Position:

316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

66.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

82.6

0.73

0.8

77.1

30.9

Minor 5ss

41.8

-0.9

2.8

49.2

41.2

Minor BPS

77.4

0.94

1.7

92.91

35.6

Associated Gene:

Gene:

AP1G1

Ensembl Gene ID:

ENSAPLG00000014217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018459

21244921 - 21287246

42326

ENSAPLT00000014910

21253681 - 21287246

33566

ENSAPLT00000032019

21244921 - 21287246

42326

ENSAPLT00000031037

21244921 - 21283471

38551