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Intron Name: Anas_platyrhynchos_platyrhynchos_12_21270001_21270849_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21270001 - 21270849

Intron Length:

849

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

GCTGTTATCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTTTTTACTT

Flanking Amino Acid:

RFLLNNDKNIRYVALTSLLK

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

29.3

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

71.2

0.48

43.3

Minor 5ss

41.9

-0.9

2.9

58.7

45.8

Minor BPS

70.1

0.71

1.5

86.64

33.8

Associated Gene:

Gene:

AP1G1

Ensembl Gene ID:

ENSAPLG00000014217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032019

21244921 - 21287246

42326

ENSAPLT00000031037

21244921 - 21283471

38551

ENSAPLT00000018459

21244921 - 21287246

42326

ENSAPLT00000014910

21253681 - 21287246

33566