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Intron Name: Anas_platyrhynchos_platyrhynchos_12_21275228_21276819_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21275228 - 21276819

Intron Length:

1592

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TACGTTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TCCTCTTGAATA

Flanking Amino Acid:

IDTIMRVLTTAGSYVRDDAV

Intron Amino Acid Position:

438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

31.9

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

79.4

0.66

0.9

73.1

36.9

Minor 5ss

32.5

-2

3.2

40.8

45.4

Minor BPS

63.1

0.41

1.4

67.43

39.9

Associated Gene:

Gene:

AP1G1

Ensembl Gene ID:

ENSAPLG00000014217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018459

21244921 - 21287246

42326

ENSAPLT00000014910

21253681 - 21287246

33566

ENSAPLT00000032019

21244921 - 21287246

42326

ENSAPLT00000031037

21244921 - 21283471

38551