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Intron Name: Anas_platyrhynchos_platyrhynchos_12_21277345_21277855_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21277345 - 21277855

Intron Length:

511

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAGCCT

5'SS Class:

major

3'SS Sequence:

TGTACCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAC

U12 Branch Point Sequence:

CTTTTTGTACCT

Flanking Amino Acid:

GQCEEEEPIQVTEDEVLDIL

Intron Amino Acid Position:

509

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

42.2

Major BPS

61.6

0.29

1.4

63.4

Major PPT

80.9

0.7

0.9

77.3

36.8

Minor 5ss

38.8

-1.3

3.4

47.3

Minor BPS

48.9

-0

2.2

74.22

43.6

Associated Gene:

Gene:

AP1G1

Ensembl Gene ID:

ENSAPLG00000014217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018459

21244921 - 21287246

42326

ENSAPLT00000014910

21253681 - 21287246

33566

ENSAPLT00000032019

21244921 - 21287246

42326

ENSAPLT00000031037

21244921 - 21283471

38551