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Intron Name: Anas_platyrhynchos_platyrhynchos_12_21277984_21278611_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21277984 - 21278611

Intron Length:

628

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGTT

U12 Branch Point Sequence:

CTCTCCCCACAG

Flanking Amino Acid:

KLSTRFTCTVNRIKKVVSIY

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

80.3

27.7

Major BPS

38.1

-0.7

4.3

71.4

45.1

Major PPT

74.9

0.56

0.7

68.3

25.5

Minor 5ss

39.1

-1.2

2.9

50.9

39.6

Minor BPS

40.1

-0.8

2.1

45.33

46.6

Associated Gene:

Gene:

AP1G1

Ensembl Gene ID:

ENSAPLG00000014217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014910

21253681 - 21287246

33566

ENSAPLT00000032019

21244921 - 21287246

42326

ENSAPLT00000031037

21244921 - 21283471

38551

ENSAPLT00000018459

21244921 - 21287246

42326