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Intron Name: Anas_platyrhynchos_platyrhynchos_12_21282233_21282458_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21282233 - 21282458

Intron Length:

226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGGGGC

5'SS Class:

major

3'SS Sequence:

TTTTTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATTAT

U12 Branch Point Sequence:

TGATCATTATTT

Flanking Amino Acid:

SQPLFNDIAAGIPSITAYNK

Intron Amino Acid Position:

708

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.2

64.8

41.3

Major BPS

72.1

0.55

1.1

62.3

43.7

Major PPT

1.03

0.5

92.7

17.1

Minor 5ss

25.9

-2.8

3.2

33.2

Minor BPS

56.6

0.28

1.9

75.14

41.3

Associated Gene:

Gene:

AP1G1

Ensembl Gene ID:

ENSAPLG00000014217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032019

21244921 - 21287246

42326

ENSAPLT00000031037

21244921 - 21283471

38551

ENSAPLT00000018459

21244921 - 21287246

42326

ENSAPLT00000014910

21253681 - 21287246

33566